setup.py
src/mist/__init__.c
src/mist/__init__.py
src/mist.egg-info/PKG-INFO
src/mist.egg-info/SOURCES.txt
src/mist.egg-info/dependency_links.txt
src/mist.egg-info/entry_points.txt
src/mist.egg-info/not-zip-safe
src/mist.egg-info/top_level.txt
src/mist/apps/AbSeq.c
src/mist/apps/AbSeq.py
src/mist/apps/AddtoBam.c
src/mist/apps/AddtoBam.py
src/mist/apps/AnnotateMolecules.c
src/mist/apps/AnnotateMolecules.py
src/mist/apps/AtacMotifAnalysis.c
src/mist/apps/AtacMotifAnalysis.py
src/mist/apps/CalcSeqSaturation.c
src/mist/apps/CalcSeqSaturation.py
src/mist/apps/CheckFastqs.c
src/mist/apps/CheckFastqs.py
src/mist/apps/CheckReferences.c
src/mist/apps/CheckReferences.py
src/mist/apps/CountCellsBioproducts.c
src/mist/apps/CountCellsBioproducts.py
src/mist/apps/GenerateH5MU.c
src/mist/apps/GenerateH5MU.py
src/mist/apps/GetDataTables.c
src/mist/apps/GetDataTables.py
src/mist/apps/MachineResources.c
src/mist/apps/MachineResources.py
src/mist/apps/Metrics.c
src/mist/apps/Metrics.py
src/mist/apps/Peak_Annotation.c
src/mist/apps/Peak_Annotation.py
src/mist/apps/RunBaseName.c
src/mist/apps/RunBaseName.py
src/mist/apps/RunQualCLAlign.c
src/mist/apps/RunQualCLAlign.py
src/mist/apps/SampleTag.c
src/mist/apps/SampleTag.py
src/mist/apps/WTA_add_on_metrics.c
src/mist/apps/WTA_add_on_metrics.py
src/mist/apps/__init__.c
src/mist/apps/__init__.py
src/mist/apps/_version.c
src/mist/apps/_version.py
src/mist/apps/annotation_filter.c
src/mist/apps/annotation_filter.py
src/mist/apps/cell_classifier.c
src/mist/apps/cell_classifier.py
src/mist/apps/cell_keys.c
src/mist/apps/cell_keys.py
src/mist/apps/cell_label_noise.c
src/mist/apps/cell_label_noise.py
src/mist/apps/dbec_resolve.c
src/mist/apps/dbec_resolve.py
src/mist/apps/dim_reduction.c
src/mist/apps/dim_reduction.py
src/mist/apps/fileSplitter.c
src/mist/apps/fileSplitter.py
src/mist/apps/gene_summary.c
src/mist/apps/gene_summary.py
src/mist/apps/improved_cell_label_noise.c
src/mist/apps/improved_cell_label_noise.py
src/mist/apps/print_version.c
src/mist/apps/print_version.py
src/mist/apps/render_visual_metrics.c
src/mist/apps/render_visual_metrics.py
src/mist/apps/rsec_resolve.c
src/mist/apps/rsec_resolve.py
src/mist/apps/utils.c
src/mist/apps/utils.py
src/mist/apps/atac/__init__.c
src/mist/apps/atac/__init__.py
src/mist/apps/atac/atac_align_reads.c
src/mist/apps/atac/atac_align_reads.py
src/mist/apps/atac/atac_call_cells.c
src/mist/apps/atac/atac_call_cells.py
src/mist/apps/atac/atac_call_peaks.c
src/mist/apps/atac/atac_call_peaks.py
src/mist/apps/atac/atac_generate_fragments.c
src/mist/apps/atac/atac_generate_fragments.py
src/mist/apps/vdj/VDJ_Compile_Results.c
src/mist/apps/vdj/VDJ_Compile_Results.py
src/mist/apps/vdj/VDJ_Compile_Results_Metrics.c
src/mist/apps/vdj/VDJ_Compile_Results_Metrics.py
src/mist/apps/vdj/VDJ_RSEC_Reads.c
src/mist/apps/vdj/VDJ_RSEC_Reads.py
src/mist/apps/vdj/__init__.c
src/mist/apps/vdj/__init__.py
src/mist/apps/vdj/mergeDuplicateSeq.c
src/mist/apps/vdj/mergeDuplicateSeq.py
src/mist/lib/MistLogger.c
src/mist/lib/MistLogger.py
src/mist/lib/MistShellUtils.c
src/mist/lib/MistShellUtils.py
src/mist/lib/SectionedCsvFile.c
src/mist/lib/SectionedCsvFile.py
src/mist/lib/__init__.c
src/mist/lib/__init__.py
src/mist/lib/constants.c
src/mist/lib/constants.py
src/mist/lib/exceptions.c
src/mist/lib/exceptions.py
src/mist/lib/parsing.c
src/mist/lib/parsing.py